dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001345_36|CGC4
Gene ID: MGYG000001345_03723
Location and strand information: 222708 - 223151 (+)
Family: 1.E.14.1.13
Protein type: TC
Protein description: Holin-like protein CidA

Gene clsuter ID: MGYG000001345_36|CGC4
Gene ID: MGYG000001345_03724
Location and strand information: 223148 - 223843 (+)
Family: 2.A.122.1.1
Protein type: TC
Protein description: Inner membrane protein YohK

Gene clsuter ID: MGYG000001345_36|CGC4
Gene ID: MGYG000001345_03725
Location and strand information: 223900 - 224817 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001345_36|CGC4
Gene ID: MGYG000001345_03726
Location and strand information: 224831 - 225847 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001345_36|CGC4
Gene ID: MGYG000001345_03727
Location and strand information: 225933 - 227066 (-)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YteR
Protein isoelectric point: 6.0529
Protein molecular weight: 43239.67
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001345_36|CGC4
Gene ID: MGYG000001345_03728
Location and strand information: 227071 - 228366 (-)
Family: GH145|PL42
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.0247
Protein molecular weight: 49650.98
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001345_36|CGC4
Gene ID: MGYG000001345_03729
Location and strand information: 228381 - 229403 (-)
Family: GH43_24|GH43
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.2994
Protein molecular weight: 38475.73
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001345_36|CGC4
Gene ID: MGYG000001345_03730
Location and strand information: 229432 - 230709 (-)
Family: GH154
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.9768
Protein molecular weight: 49291.53
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001345_36|CGC4
Gene ID: MGYG000001345_03731
Location and strand information: 230812 - 232752 (-)
Family: GH43|GH43_24|GH16|GH16_3
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.367
Protein molecular weight: 74472.57
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001345_36|CGC4
Gene ID: MGYG000001345_03732
Location and strand information: 232797 - 234272 (-)
Family: GH16_3
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.598
Protein molecular weight: 56217.01
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001345_36|CGC4
Gene ID: MGYG000001345_03733
Location and strand information: 234291 - 235184 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001345_36|CGC4
Gene ID: MGYG000001345_03734
Location and strand information: 235212 - 236849 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001345_36|CGC4
Gene ID: MGYG000001345_03735
Location and strand information: 236878 - 239892 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001345_36|CGC4
Gene ID: MGYG000001345_03736
Location and strand information: 239926 - 241857 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001345_36|CGC4
Gene ID: MGYG000001345_03737
Location and strand information: 241873 - 245001 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000001345_36|CGC4
Gene ID: MGYG000001345_03738
Location and strand information: 245192 - 249346 (-)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000001345_36|CGC4
Gene ID: MGYG000001345_03739
Location and strand information: 250261 - 252210 (-)
Family: GH97
Protein type: CAZyme
Protein description: Retaining alpha-galactosidase
Protein isoelectric point: 6.0509
Protein molecular weight: 73302.28
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001345_36|CGC4
Gene ID: MGYG000001345_03740
Location and strand information: 252247 - 254712 (-)
Family: GH51
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.4639
Protein molecular weight: 92338.23
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001345_36|CGC4
Gene ID: MGYG000001345_03741
Location and strand information: 255090 - 256067 (-)
Family: GH43_19|GH43
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.1559
Protein molecular weight: 37073.41
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001345_36|CGC4
Gene ID: MGYG000001345_03742
Location and strand information: 256091 - 257149 (-)
Family: CBM32|GH35
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 9.166
Protein molecular weight: 40150.1
NCBI Blastp with this gene.
Protein sequence: copy AA seq

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is arabinogalactan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001345_03723	Holin-like protein CidA	TC	222708	223151	+	1.E.14.1.13
MGYG000001345_03724	Inner membrane protein YohK	TC	223148	223843	+	2.A.122.1.1
MGYG000001345_03725	hypothetical protein	null	223900	224817	+	LPG_synthase_C
MGYG000001345_03726	hypothetical protein	null	224831	225847	+	Acetyltransf_9
MGYG000001345_03727	Unsaturated rhamnogalacturonyl hydrolase YteR	CAZyme	225933	227066	-	GH105
MGYG000001345_03728	hypothetical protein	CAZyme	227071	228366	-	GH145\| PL42
MGYG000001345_03729	hypothetical protein	CAZyme	228381	229403	-	GH43_24\| GH43
MGYG000001345_03730	hypothetical protein	CAZyme	229432	230709	-	GH154
MGYG000001345_03731	hypothetical protein	CAZyme	230812	232752	-	GH43\| GH43_24\| GH16\| GH16_3
MGYG000001345_03732	hypothetical protein	CAZyme	232797	234272	-	GH16_3
MGYG000001345_03733	hypothetical protein	null	234291	235184	-	F5_F8_type_C
MGYG000001345_03734	hypothetical protein	null	235212	236849	-	SusD-like_3\| SusD_RagB
MGYG000001345_03735	hypothetical protein	TC	236878	239892	-	1.B.14.6.1
MGYG000001345_03736	hypothetical protein	null	239926	241857	-	SusD-like_3\| SusD_RagB
MGYG000001345_03737	TonB-dependent receptor SusC	TC	241873	245001	-	1.B.14.6.1
MGYG000001345_03738	Sensor histidine kinase RcsC	TF	245192	249346	-	HTH_AraC
MGYG000001345_03739	Retaining alpha-galactosidase	CAZyme	250261	252210	-	GH97
MGYG000001345_03740	hypothetical protein	CAZyme	252247	254712	-	GH51
MGYG000001345_03741	hypothetical protein	CAZyme	255090	256067	-	GH43_19\| GH43
MGYG000001345_03742	hypothetical protein	CAZyme	256091	257149	-	CBM32\| GH35
Protein ID	Protein Name	Type	Start	End	Strand	Signature